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202-SN1-RE · Hybridization and the quantum model of bonding
Pauling resolves the contradiction in two steps: first an electron is promoted, which costs energy, then the valence orbitals are combined mathematically into equivalent orbitals. The energy balance is largely favourable.
c) Explain what sp3 hybridization is and how many hybrid orbitals it produces.
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Answer
c)One 2s and three 2p give FOUR identical hybrids, arranged in a tetrahedron
c) sp3 hybridization is the mathematical combination of the 2s orbital and the THREE 2p orbitals. It produces FOUR identical hybrid orbitals, of equal energy, intermediate between those of s and p, and pointing toward the four corners of a tetrahedron. Each holds one unpaired electron and can form a σ bond. The name sp3 gives the recipe: one part s, three parts p.
The molecule in the figure is drawn as a skeletal (line-angle) formula: every vertex is a carbon and the hydrogens are implied.
a) Recall the four steps of the naming method, then name the molecule in the figure and give its molecular formula.
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Answer
a)4-ethyl-2,3-dimethylhexane, C10H22
a) Method: 1) find the LONGEST chain; 2) number from the end that gives the lowest locants; 3) list the substituents in ALPHABETICAL order; 4) assemble. Here the longest chain has 6 carbons (hexane), with two methyl groups and one ethyl group. Numbering from the left: methyls at 2 and 3, ethyl at 4, that is the locants {2, 3, 4}; from the right we would get {3, 4, 5}, which is worse. Alphabetical order: ethyl before methyl (the prefixes di- and tri- do not count). Name: 4-ethyl-2,3-dimethylhexane. Molecular formula: 10 carbons, acyclic alkane, so C10H22 (CnH2n+2).
pKa data: ethanol 16, phenol 10, ethanoic acid 4.8. Basicity (by the pKa of the conjugate acid BH+): cyclohexylamine 10.7, aniline 4.6. The figure gives the five compounds and their pKa.
b) Count the resonance structures of the phenoxide ion and state over which atoms of the ring the charge is spread.
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Answer
b)4 structures: O, ortho, ortho, para
b) Four resonance structures: the charge on oxygen (the major structure, with the charge on the most electronegative atom), then three structures where it enters the ring, on the two ORTHO carbons and on the PARA carbon. Never at meta: the conjugation gives no access to it. This ortho-ortho-para trio is a signature that will come back throughout aromatic chemistry.
An alkane has only C−C and C−H bonds, strong and practically nonpolar. It is therefore chemically inert, so much so that it was once called paraffin, from the Latin for “little affinity”. Its only important spontaneous reaction is combustion.
Molar masses: C 12.01; H 1.008; O 16.00 g/mol. Density of octane: 0.703 g/mL. The figure below shows these two isomers.
c) Balance the complete combustion of propane, then that of octane.
c) Propane: C3H8+5O2→3CO2+4H2O. Octane: since the coefficient 23×8+1=12.5 is not an integer, double everything: 2C8H18+25O2→16CO2+18H2O. Oxygen check: 2×25=50 atoms on the left, 2×16+18=50 on the right.
A primary alkyl halide is the hub of organic chemistry: it accepts almost any nucleophile and gives access, in a single step, to most of the major functional groups. One still has to choose the right retrosynthetic disconnection. The figure below shows the ether targeted in b) and the synthesis in d).
b) We want to prepare methyl tert-butyl ether CH3−O−C(CH3)3 by the Williamson synthesis. Two disconnections are possible. Write both, say which one succeeds and what the other actually gives.
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Answer
b)Tert-butoxide + iodomethane; the other gives 2-methylpropene
b) First disconnection: tert-butoxide ion (CH3)3CO− plus iodomethane CH3I. The substrate is methyl, hence ideal for a second-order substitution, and the reaction succeeds perfectly despite the bulk of the base. Second disconnection: methoxide ion CH3O− plus 2-bromo-2-methylpropane. The substrate is tertiary, second-order substitution is impossible there because of crowding, and methoxide is a base: the only reaction observed is an elimination, which gives 2-methylprop-1-ene and regenerates methanol. Not a trace of ether is obtained. The rule is absolute: in a Williamson synthesis, the ALKOXIDE can be as bulky as you like, but the HALOALKANE must be primary or methyl. This is a perfect example of two formally equivalent retrosynthetic disconnections of which only one works.
Chapter 5 · Substitution and elimination: SN1, SN2, E1, E2
The SN2 attacks the carbon from behind and turns it inside out like an umbrella: its geometry is INVERTED. The SN1 goes through a planar carbocation, attacked on both faces: a RACEMIC mixture is obtained. But the letter R or S is read from the priorities, not from the geometry.
The figure shows the three substrates as wedge-and-dash structures, with their reagent: A, (S)-2-iodoheptane and sodium azide NaN3 in DMSO; B, (R)-3-bromo-3-methylhexane in a warm mixture of water and propanone; C, (S)-2-bromopentan-1-ol and sodium cyanide in DMSO.
a) A: name the mechanism, then give the product with its configuration.
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Answer
a)SN2: (R)-2-azidoheptane
a) Secondary carbon, N3− an excellent nucleophile and a weak base, aprotic DMSO: SN2.
Before: I> pentyl chain >CH3>H. After: N3> pentyl chain >CH3>H.
The entering group takes rank 1, like the leaving group: inverted geometry gives an inverted letter. Product: (R)-2-azidoheptane.
When the ring already carries a substituent, that substituent controls both the RATE of the second substitution and its POSITION. Both effects follow from the same reasoning about the intermediate carbocation. The figure below shows the six corresponding monosubstituted compounds.
a) Classify as activating or deactivating: −CH3, −OH, −NO2, −NH2, −COOH, −Cl.
a) ACTIVATING: −CH3, weakly, by an electron-donating inductive effect; −OH and −NH2, strongly, by the electron-donating resonance effect of the lone pair. DEACTIVATING: −NO2 and −COOH, strongly, by an electron-withdrawing effect; −Cl, moderately.
pKa: phenol 10.0; ethanol 16.0; water 15.7. The figure gives the ethers studied.
b) We want to prepare ethoxybenzene C6H5−O−CH2CH3 by the Williamson synthesis. Write the two possible disconnections and say which one is ruled out. For the one retained, the anion is formed with sodium hydroxide: calculate the constant of this deprotonation, then that of the deprotonation of ethanol by sodium hydroxide. Why is sodium hydroxide unsuitable for preparing an alkoxide, and what must be used?
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Answer
b)Phenoxide + bromoethane; K=105.7 against K≈0.50: an alkoxide requires Na or NaH
b) First disconnection: phenoxide ion C6H5O− and bromoethane. The carbon attacked is primary, and the SN2 proceeds without difficulty. Second disconnection: ethoxide ion and bromobenzene. It is ruled out, because the carbon to be attacked belongs to the aromatic ring, where neither the SN2 nor the SN1 is possible, for the reasons detailed in d). It remains to form the phenoxide. The equilibrium C6H5OH+HO−⇌C6H5O−+H2O has the constant K=10pKa(H2O)−pKa(phenol)=1015.7−10.0=105.7≈5×105: the deprotonation is complete, and sodium hydroxide is enough. For ethanol, the same constant is 1015.7−16.0=10−0.3≈0.50: the equilibrium stays split, a good part of the alcohol is not deprotonated, and the remaining HO− ions also attack the haloalkane, giving an alcohol instead of the ether. An alkoxide must therefore be prepared by an IRREVERSIBLE reaction: sodium metal, 2CH3CH2OH+2Na→2CH3CH2O−Na++H2, or sodium hydride NaH, whose dihydrogen escapes and cannot take the proton back. The rule to remember: a phenol is deprotonated by sodium hydroxide, an alcohol requires sodium or NaH; and the oxygen of the ether always comes from the partner whose carbon cannot be attacked.
Nucleophilic addition proceeds differently depending on whether the nucleophile is strong in basic medium or weak in acidic medium, but it always ends up in the same place.
Hydration constants K=[carbonyl][hydrate] in dilute aqueous solution: methanal 2.2×103; ethanal 1.4; propanone 2.0×10−3. The figure shows the three carbonyls of the table and butan-2-one.
c) Calculate the percentage of hydrated form for the three compounds of the table. Comment on the six-order-of-magnitude gap between methanal and propanone, and say why the hydrate is almost never isolable.
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Answer
c)99.95%; 58.3%; 0.20%
c) The percentage hydrated is 1+KK. For methanal, 22012200=99.95 percent. For ethanal, 2.41.4=58.3 percent. For propanone, 1.00200.0020=0.20 percent. The gap between the extremes is a factor of 1.1×106 on the constants, and it is entirely explained by the two reasons of exercise 1: the two methyl groups of propanone crowd the tetrahedral carbon to be formed and at the same time lower its positive charge, whereas methanal has neither handicap. One can also read the equilibrium from the other end: the more stable the carbonyl, the less it hydrates. Finally, the hydrate is almost never isolable because the reaction is an EQUILIBRIUM in aqueous solution: as soon as the water is evaporated to recover it, Le Chatelier's principle shifts the equilibrium toward the carbonyl and the hydrate decomposes between your fingers. The only exceptions are those where the equilibrium is crushed on the hydrate side, like the chloral of exercise 1.
Chapter 9 · Carboxylic acids and their derivatives
The two reactions connect the same compounds, the ester on one side, the acid and the alcohol on the other. One is a mediocre equilibrium, the other goes to completion, and the difference comes down to a single step.
Data: for CH3COOH+C2H5OH⇌CH3COOC2H5+H2O, the equilibrium constant is K=4.0 at room temperature. The figure recalls the equilibrium under study.
b) Repeat with 1.00 mol of acid and 4.00 mol of alcohol. Calculate the new yield relative to the acid and comment.
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Answer
b)x=0.930 mol: 93.0%
b) With 4.00 mol of alcohol, the relation becomes K=(1−x)(4−x)x2=4.0, that is x2=4(4−5x+x2), then 3x2−20x+16=0. The discriminant is 400−192=208, so x=620−208=620−14.42=0.930 mol, the root with the plus sign being rejected since it would exceed the initial amount of acid. The yield relative to the acid therefore rises from 66.7 to 93.0 percent. The expected comment is twofold. On the one hand, Le Chatelier's principle works exactly as announced: adding a reactant shifts the equilibrium. On the other hand, the yield is calculated here relative to the LIMITING reactant, the acid, and it would be absurd to calculate it relative to the alcohol, of which more than three quarters remains unused. In practice the cheaper reactant is used in excess, and the surplus is recovered by distillation.
Three isomeric amines of formula C3H9N, with a molar mass of 59.11 g/mol, boil at 48, 37 and 3 degrees Celsius respectively. Propan-1-ol, with a molar mass of 60.10 g/mol, boils at 97 degrees.
Data: electronegativities N3.04 and O3.44. Nitrogen inversion barrier about 25 kJ/mol; take A=1.0×1013 s−1, R=8.314 J/(mol·K) and T=298 K. The figure below shows N-ethyl-N-methylpropan-1-amine.
a) Give the four isomers of C3H9N, name them and state the class of each. Explain how the counting of classes differs from that of alcohols.
a) The four isomers are propan-1-amine CH3CH2CH2NH2 and propan-2-amine (CH3)2CHNH2, both PRIMARY; N-methylethanamine CH3CH2NHCH3, SECONDARY; and N,N-dimethylmethanamine (CH3)3N, TERTIARY. The counting is radically different from that of alcohols, and this is the most common pitfall of the chapter. For an alcohol, you look at the CARBON bearing the −OH group and count how many other carbons are bonded to it. For an amine, you look at the NITROGEN and count how many carbons are bonded to it. The consequence is immediate: propan-2-amine is a PRIMARY amine, whereas propan-2-ol is a SECONDARY alcohol, even though the skeleton is the same. You must never carry the reasoning over from one chapter to the other.
Chapter 11 · Spectroscopy and structure determination
The n+1 rule is the simplest in the chapter and the one most often applied wrongly. The figure shows its origin: it builds a triplet from two neighbours, by splitting the signal once for each neighbour.
The final heights are in the ratio 1:2:1, indicated under each line.
b) Predict the multiplicity and the integration of every signal of 1-bromopropane, then of 2-bromopropane. Say which of the two molecules NMR identifies faster.
b) For 1-bromopropane CH3CH2CH2Br: the CH2 carried by the bromine comes out near 3.4 ppm, it has two neighbours so it is a TRIPLET integrating for 2; the central CH2 comes out near 1.9 ppm, it has 2+3=5 neighbours so it is a SEXTET integrating for 2; the methyl comes out near 1.0 ppm, it has two neighbours so it is a TRIPLET integrating for 3. That makes three signals, 2:2:3. For 2-bromopropane (CH3)2CHBr: the six hydrogens of the two methyls are EQUIVALENT by symmetry and have only one neighbour, so a DOUBLET integrating for 6 near 1.7 ppm; the central hydrogen has six neighbours, so a SEPTET integrating for 1 near 4.3 ppm. That makes only two signals, 6:1. It is 2-bromopropane that NMR identifies faster: two signals instead of three, an integration of 6:1 that cannot be mistaken, and a septet whose sight alone is enough to conclude. This is the ISOPROPYL pattern, the second major pattern to recognize at once after the ethyl pattern.
All the stereochemistry of sugars rests on a drawing convention more than a century old, and on an elementary count.
The figure shows the two glyceraldehydes in Fischer projection, the simplest of the aldoses.
a) State the two conventions of the Fischer projection, then say which bonds point toward the viewer and which point away.
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Answer
a)Vertical chain, carbonyl at the top; horizontal bonds toward the viewer
a) First convention: the carbon chain is VERTICAL and the most oxidized carbon, here the carbonyl, is placed at the TOP. Second convention: each asymmetric carbon sits at the intersection of a cross, its two side substituents being carried by the horizontal lines. The spatial rule, which is the heart of the convention and is often forgotten, is that the HORIZONTAL bonds point TOWARD the viewer, in front of the plane of the page, while the VERTICAL bonds point away from the viewer, toward the back. A Fischer projection is therefore not a flat drawing but the flattened representation of a molecule in which each carbon is seen in an imposed orientation. A strict handling rule follows: a projection can be rotated by 180 degrees in the plane of the page without changing anything, but a rotation by 90 degrees or simply flipping the page over INVERTS the configuration of every center, which is the classic error.
Chapter 13 · Synthesis and retrosynthetic analysis
On an aromatic ring, two steps that use exactly the same reagents do not give the same product depending on their ORDER, because the first group installed directs the second.
The habit to repeat fits in one question: can I swap these two steps?
The figure shows the two targets of the day, both to be prepared from benzene.
Molar masses in g/mol: C 12.01; H 1.008; N 14.01; O 16.00; Br 79.90.
a) For −OCH3, −CH3, −Cl, −COCH3, −NO2 and −SO3H, say whether the group activates or deactivates the ring and where it directs the next substitution.
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Answer
a)Ortho-para activators: −OCH3, −CH3; −Cl deactivating but ortho-para; −COCH3, −NO2, −SO3H meta deactivators
a) −OCH3: oxygen donates a lone pair to the ring by resonance, an effect that outweighs its inductive withdrawal, hence strongly ACTIVATING, ORTHO and PARA directing. −CH3: inductive donor only, weakly activating, ortho and para. −Cl: strong inductive acceptor but resonance donor, hence WEAKLY deactivating and yet ortho and para directing. This is the exception to know, and it is understood by separating the two questions: the inductive effect decides the RATE, resonance decides the POSITION, because only resonance stabilizes the carbocation intermediate of ortho or para attack. −COCH3, −NO2 and −SO3H: acceptors, DEACTIVATING, META directing. The grid in the solution ranks the six groups.
Liquid-liquid extraction exploits a difference in SOLUBILITY between two immiscible phases. You shake, each species distributes itself according to its affinity, you let the layers settle, you open the stopcock.
That leaves the question you ask yourself ten times per session in front of the funnel: which of the two layers is the organic one? The answer is not guessed, it is read in a table of densities.
Solvent
ρ (g/mL)
Solvent
ρ (g/mL)
Diethyl ether
0.713
Water
1.000
Toluene
0.867
Saturated NaCl solution
1.20
Ethyl acetate
0.902
Dichloromethane
1.326
Methanol
0.792
Chloroform
1.489
b) In the funnel of the figure, the lower layer occupies 60.0 mL and weighs 79.6 g. Calculate its density and identify the solvent. Was methanol a possible candidate?
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Answer
b)1.327 g/mL, so dichloromethane; methanol is ruled out because it is miscible with water
b) The density is 60.079.6=1.327 g/mL. The table gives dichloromethane at 1.326: it is that one. Methanol was not a possible candidate, and for a reason that has nothing to do with its density: it is MISCIBLE with water in all proportions, so it never forms a second layer. This is the trap of the table, which lists extraction solvents side by side with a solvent that extracts nothing. An extraction solvent must satisfy three conditions at once: be immiscible with water, dissolve the product better than water does, and boil low enough to be evaporated afterwards without heating the product. Methanol, ethanol and acetone fail the first; ether, dichloromethane, ethyl acetate and toluene satisfy it. The field test, when in doubt about which layer is which, is to add a drop of water at the top of the funnel and watch where it goes: if it passes through the upper layer, that layer is organic.
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