Organic Chemistry 202-SNU-RE • CEGEP, Montreal

Revision sheet: spectroscopy and structure determination (202-SNU-RE)

Structure determination is the one chapter where almost nothing is calculated: you read. That is exactly why it goes wrong, because a piece of data read too fast, a carbonyl band at 17351735 taken for 17151715, steers the whole conclusion.

This sheet leaves the tables in your course notes and gathers the order of reading: the molecular formula first, the functional groups next, the skeleton last, and a systematic cross-check before concluding.

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The thread of the chapter

No single technique gives the structure: mass gives the formula, infrared gives the functional groups, NMR gives the skeleton, and it is the CROSS-CHECKING of the four that concludes.

This chapter is part of 202-SNU-RE, Organic Chemistry

The essentials

The degree of unsaturation, always first

  • • 2nC+2+nN−nH−nX2\dfrac{2n_{C}+2+n_{N}-n_{H}-n_{X}}{2}, oxygen being IGNORED.
  • • Each unit is worth one double bond or one ring; an aromatic ring is worth FOUR.
  • • A degree of zero rules out every carbonyl, every alkene and every ring: the molecule is saturated.
benzene C₆H₆: 43 C=C + 1 ringH₃CCOCH₂CH₃Oethyl ethanoate C₄H₈O₂: 1one C=O bondOO1,4-dioxane C₄H₈O₂: 1one ring, no C=O
Every unit gets PLACED: benzene uses four; two C₄H₈O₂ of degree 1 spend it, one as a C=O, the other as a ring.

This number is calculated before opening a single spectrum. It immediately steers the reading of the infrared, and it eliminates most of the structures you would be tempted to propose.

Mass spectrometry

  • • The M+M^{+} peak gives the molar mass. NITROGEN RULE: an ODD mass signals an ODD number of nitrogens.
  • • M+1M+1 is about 1.1 %1.1\,\% of MM per carbon atom: this is how carbons are counted.
  • • ONE chlorine gives M+2M+2 at 32 %32\,\% of MM; ONE bromine gives M+2M+2 roughly EQUAL to MM.
  • • Characteristic losses: 1515 for CH3CH_{3}, 1717 for OHOH, 1818 for H2OH_{2}O, 2929 for CHOCHO or C2H5C_{2}H_{5}, 3131 for OCH3OCH_{3}, 4545 for COOHCOOH.
MM+2MM+2one chlorineone bromineM+2 at 32 %M+2 almost equal to M
The isotope cluster settles it at a glance: an M+2M+2 peak at one third of MM points to a chlorine, an M+2M+2 peak of the same height points to a bromine.

Two fragments to know: m/z=91m/z=91 is the tropylium cation, the signature of a benzylic group; m/z=43m/z=43 is the acylium CH3CO+CH_{3}CO^{+}, the signature of a methyl ketone.

Infrared, and above all the position of the carbonyl

  • • Alcohol O−HO-H 32003200 to 36003600, broad; acid O−HO-H 25002500 to 33003300, VERY broad; N−HN-H 33003300 to 35003500, TWO bands if primary, ONE if secondary.
  • • C−HC-H sp3sp^{3} 28502850 to 29602960; sp2sp^{2} 30003000 to 31003100; terminal alkyne 33003300, sharp. C≡NC\equiv N 22502250. C=CC=C 16501650. Aromatic 14501450 to 16001600.
  • • POSITION OF THE CARBONYL: acyl chloride 18001800; anhydride 17601760 AND 18201820; ester 17351735; aldehyde 17251725; ketone 17151715; acid 17101710; amide 16501650.
  • • Conjugation LOWERS it by about 3030 cm−1^{-1}, ring strain RAISES it.
16501700175018001850C=O wavenumber (cm⁻¹)amide 1650acid 1710ketone 1715aldehyde 1725ester 1735chloride 1800anhydride (1760, 1820)
One band, seven derivatives: twenty wavenumbers separate a ketone from an ester, and it is this gap you must read, not the mere presence of the peak.

The aldehyde is also signalled by a DOUBLET of C−HC-H bands at 27202720 and 28202820 cm−1^{-1}, absent from every ketone: it is the only infrared way to separate them with certainty.

NMR, of the proton and of the carbon

  • • Four pieces of information: the NUMBER of signals gives the nonequivalent hydrogens; the SHIFT gives the environment; the INTEGRATION gives the PROPORTIONS; the MULTIPLICITY gives the number of NEIGHBOURS, by the n+1n+1 rule.
  • • Shifts in ppm: TMSTMS 00; alkane 0.90.9 to 1.51.5; alpha to a C=OC=O 2.12.1 to 2.52.5; benzylic 2.32.3; bonded to OO 3.43.4 to 4.04.0; vinylic 4.54.5 to 6.56.5; aromatic 6.56.5 to 8.08.0; aldehyde 9.59.5 to 1010; acid 1010 to 1313, broad.
  • • Carbon-1313 NMR: with proton decoupling, each nonequivalent carbon gives ONE SINGLET.
  • • The number of carbon signals therefore directly measures the SYMMETRY of the molecule.
tripletquartetthe CH3 sees 2 neighboursthe CH2 sees 3 neighbourscount the neighbours, never the hydrogens on the same carbon
An ethyl group and its two signals: the methyl sees two neighbours and comes out as a triplet, the methylene sees three and comes out as a quartet.

The abundance of carbon-1313 is only 1.1 %1.1\,\%: two carbon-1313 atoms are practically never neighbours, which is why they do not couple with each other.

The mistakes that cost marks

These are the errors I correct most often in session. Each one costs marks on a paper, even when the reasoning behind it is right.

1. Counting the oxygen in the degree of unsaturation

2 marks, and the whole reading of the spectra goes astray

What not to write

“C4H8O2C_{4}H_{8}O_{2}: I subtract the two oxygens as well.”

What to write

“Oxygen is IGNORED: 2×4+2−82=1\dfrac{2\times 4+2-8}{2}=1.”

Why: A divalent oxygen slips into a chain without using up a hydrogen. This is also why nitrogen, being trivalent, adds one unit to the numerator.

2. Reading a bromine cluster as a chlorine

2 marks, and a wrong molecular formula

What not to write

“There is an M+2M+2 peak, so the molecule contains a chlorine.”

What to write

“Its HEIGHT must be read: 32 %32\,\% of MM for a chlorine, almost 100 %100\,\% for a bromine.”

Why: The two isotopes of bromine are almost equally abundant, those of chlorine in a ratio of three to one. The relative height is therefore a measurement, not a detail.

3. Reversing the nitrogen rule

1.5 marks, and a family of compounds wrongly ruled out

What not to write

“The molar mass is even, so there is a nitrogen.”

What to write

“An ODD mass signals an ODD number of nitrogens: an even mass signals zero or two nitrogens.”

Why: Nitrogen is the only common element whose valence and mass have different parities. It is this anomaly that makes the rule usable.

4. Confusing the two O-H bands

2 marks, and a functional group wrongly assigned

What not to write

“There is a broad band near 30003000, so it is an alcohol.”

What to write

“The acid band is MUCH broader, from 25002500 to 33003300, and it overlaps the C−HC-H bands: it is its breadth that tells it apart.”

400035003000250020001500100050050100alcohol400035003000250020001500100050050100wavenumber σ (cm⁻¹)carboxylic acidbroad, 3200 to 3600VERY broad, 2500-3300and C=O near 1710
The O–H band of the acid is much broader than that of the alcohol and runs down to 2500, over the C–H bands; the C=O near 1710 confirms the acid.

Why: A carboxylic acid forms dimers through very strong hydrogen bonds, which broadens the band enormously. The final check remains the carbonyl near 17101710.

5. Assigning a carbonyl without reading its exact position

3 marks, and the structure proposed does not have the right functional group

What not to write

“There is a band near 17001700, so it is a ketone.”

What to write

“17351735 points to an ester, 17151715 to a ketone, 16501650 to an amide: twenty wavenumbers are enough to change the functional group.”

Why: This is the richest piece of data in the whole chapter. A plain “there is a carbonyl” earns almost nothing, whereas the precise value names the derivative.

6. Separating aldehyde and ketone without the characteristic doublet

1.5 marks, and a conclusion left hanging

What not to write

“The carbonyl is at 17201720, so it is impossible to decide between aldehyde and ketone.”

What to write

“We look near 27202720 and 28202820: this DOUBLET of C−HC-H bands exists only in the aldehyde.”

400035003000250020001500100050050100aldehyde2720 and 2820400035003000250020001500100050050100wavenumber σ (cm⁻¹)ketonenothing
Same carbonyl near 1720: only the doublet at 2720 and 2820 cm⁻¹ signs the aldehyde, the ketone has nothing there.

Why: The two functional groups have carbonyls too close together, 17251725 against 17151715, to decide on this criterion alone. NMR, with its signal near 9.59.5 ppm, gives the same answer.

7. Counting the hydrogens of the same carbon in the n plus one rule

2 marks, and the whole assignment of the spectrum

What not to write

“The CH3CH_{3} carries three hydrogens, so it comes out as a quartet.”

What to write

“We count the NEIGHBOURS: the CH3CH_{3} of an ethyl sees the two hydrogens of the CH2CH_{2}, so 2+1=32+1=3, a TRIPLET.”

quartet: 3 H of the samecarbon countedtriplet: 2 neighboursof the CH₂, 2 + 1 = 3the CH₃ of CH₃–CH₂–
The CH₃ of an ethyl sees the two H of the neighbouring CH₂: triplet, 2 + 1 = 3. Its own equivalent hydrogens do not count.

Why: The hydrogens of the same carbon are equivalent and do not couple with each other. The ethyl pattern, triplet plus quartet, is the most frequent in exam spectra.

8. Reading the integration as an absolute number of hydrogens

1.5 marks, and an inconsistent hydrogen count

What not to write

“The curve rises by 22 cm, so there are two hydrogens.”

What to write

“The integration gives PROPORTIONS: we scale to the smallest signal, then adjust to the total number of hydrogens in the molecular formula.”

012345δ (ppm)2 H3 H3 Hsteps in the ratio 2 : 3 : 3, scaled to C₄H₈O₂ (8 H):the steps give PROPORTIONS, not numbers
The steps of the integration curve are in the ratio 2 : 3 : 3; it is the molecular formula, eight hydrogens, that makes them 2 H, 3 H and 3 H.

Why: There is no absolute unit in NMR. The ratio 3:2:33:2:3 can describe eight hydrogens as well as sixteen: it is the molecular formula that decides.

9. Expecting multiplets in carbon NMR

1.5 marks, and a needlessly complicated reading of the spectrum

What not to write

“The neighbouring carbon should couple and give a doublet.”

What to write

“With proton decoupling, each nonequivalent carbon gives ONE SINGLET: the abundance of carbon-1313 is too low for two of them to be neighbours.”

020406080100120140160180200δ (ppm)17160.42114.2ethyl ethanoate: 4 carbons, 4 singletsa multiplet in carbon-13:wrong with proton decoupling
With proton decoupling, each nonequivalent carbon gives ONE singlet: four lines for the four carbons of ethyl ethanoate.

Why: An abundance of 1.1 %1.1\,\% means about one chance in 83008300 that two neighbouring carbons are both carbon-1313. The spectrum therefore simply counts the distinct carbons.

Which method to choose

In what order to read the four spectra

We always follow the same order, from the most general to the most precise.

  • If we have the mass spectrum → establish the molar mass, apply the nitrogen rule and read the isotope cluster

    Example: M+2M+2 at 32 %32\,\% announces a chlorine

  • If we have the molecular formula → calculate the degree of unsaturation BEFORE opening the infrared

    Example: a degree of zero rules out every carbonyl

  • If we read the infrared → look first for the carbonyl and its exact position, then the O−HO-H and N−HN-H bands

    Example: 17351735 points to an ester

  • If we read the proton NMR → count the signals, read the integration, then the multiplicities

    Example: a triplet and a quartet sign an ethyl

  • If we have the carbon NMR → count the signals to measure the symmetry

    Example: two equivalent carbons give a single peak

A structure is proposed only after cross-checking at least two techniques, and it is VERIFIED on the way back down: every piece of data in the problem must be explained by the structure retained.

What a chemical shift says

We read the value in ppm and work back to the environment.

0123456789101112δ (ppm)acidaldehydearomaticbonded to Oα to C=Oalkanedeshielded, to the leftshielded
The more electronegative atoms or circulating electrons surround the hydrogen, the further left its signal goes: from the alkane near 1 ppm to the acid beyond 10.
  • If between 0.90.9 and 1.51.5 ppm → hydrogen of an alkane, far from any withdrawing group

    Example: the terminal methyl of a chain

  • If between 2.12.1 and 2.52.5 ppm → hydrogen alpha to a carbonyl

    Example: the methyl of an acetate

  • If between 3.43.4 and 4.04.0 ppm → hydrogen carried by a carbon bonded to an OXYGEN

    Example: the methylene of an ethyl ester

  • If between 6.56.5 and 8.08.0 ppm → aromatic hydrogen

    Example: the five hydrogens of a phenyl

  • If beyond 99 ppm → aldehyde near 9.59.5, carboxylic acid from 1010 to 1313 and very broad

    Example: a singlet near 9.89.8 ppm signs the aldehyde

The shift measures DESHIELDING: the richer the environment in electronegative atoms or circulating electrons, the further the signal moves to the left of the spectrum.

How the answer is expected to be written

A marker ticks steps. Here they are in order, with the concluding sentence expected word for word.

Writing up a structure determination

When to use it: The problem gives a molecular formula and several spectra.

  1. 1 Calculate the degree of unsaturation and say what it allows.
  2. 2 Use the mass spectrum: molar mass, nitrogen, halogen, characteristic losses.
  3. 3 Read the infrared functional group by functional group, quoting the exact wavenumbers.
  4. 4 Assign every NMR signal: shift, integration, multiplicity.
  5. 5 Propose the structure, then GO BACK over every piece of data to show that it is explained.

Concluding sentence

“The degree of unsaturation is 11, the carbonyl is at 17351735 cm−1^{-1} and the spectrum shows an ethyl pattern: the compound is ethyl ethanoate.”

The trap: Proposing a structure from the first compatible piece of data, without checking the others: the marking scheme counts the verification as much as the proposal.

Marking: 1 mark the degree of unsaturation, 1 mark per technique used, 1 mark the structure, 1 mark the final verification.

Assigning the signals of an NMR spectrum

When to use it: The problem asks you to assign each peak to a group of hydrogens.

  1. 1 Draw up a table with four columns: shift, integration, multiplicity, assignment.
  2. 2 Convert the integration into numbers of hydrogens, relying on the molecular formula.
  3. 3 Deduce from each multiplicity the number of neighbours, by the n+1n+1 rule.
  4. 4 Check that the sum of the assigned hydrogens equals that of the molecular formula.

Concluding sentence

“The triplet at 1.21.2 ppm integrating for 33 H has two neighbours: it is the methyl of an ethyl group.”

The trap: Forgetting to check that the sum of the integrations matches the total number of hydrogens: it is the check that catches forgotten signals.

Marking: 0.5 mark per correctly assigned signal, 1 mark the complete table, 0.5 mark the verified sum.

Check before you hand in

Five minutes of checking recover more marks than one more problem started in a hurry.

The typical problem, taken apart

A compound of formula C4H8O2

A compound of formula C4H8O2C_{4}H_{8}O_{2} shows in the infrared an intense band at 17351735 cm−1^{-1} and no broad band near 30003000.

In proton NMR: a triplet at 1.21.2 ppm integrating for 33 H, a singlet at 2.02.0 ppm for 33 H, a quartet at 4.14.1 ppm for 22 H. Determine the structure.

0123456δ (ppm)2 H, quartet3 H, singlet3 H, triplet
The three signals of the spectrum: the triplet and the quartet make up an ethyl, and the isolated singlet points to a methyl with no neighbour.

Step 1

Degree of unsaturation: 2×4+2−82=1\dfrac{2\times 4+2-8}{2}=1, the oxygens being ignored.

Why

A single degree: there will be one double bond OR one ring, not both. The infrared will say which.

Step 2

Band at 17351735 cm−1^{-1}: it is an ESTER, and not a ketone at 17151715 or an acid at 17101710.

Why

The exact value names the derivative. The absence of a broad band near 30003000 confirms that it is not a carboxylic acid.

Step 3

Triplet at 1.21.2 ppm for 33 H and quartet at 4.14.1 ppm for 22 H: it is an ETHYL group.

Why

The triplet has two neighbours, the quartet has three: they see each other. The shift of 4.14.1 places the methylene on the oxygen of the ester.

Step 4

Singlet at 2.02.0 ppm for 33 H: a methyl with NO neighbour, alpha to the carbonyl.

Why

The absence of coupling requires a neighbouring carbon with no hydrogen, here the carbonyl carbon. The shift confirms the alpha position.

Step 5

Sum of the integrations: 3+3+2=83+3+2=8 hydrogens, consistent with C4H8O2C_{4}H_{8}O_{2}.

Why

The count closes the reading: no signal has been forgotten, which in particular rules out a broad acidic hydrogen.

Step 6

Structure: ethyl ethanoate, CH3−CO−O−CH2−CH3CH_{3}-CO-O-CH_{2}-CH_{3}.

Why

It combines the ester, the isolated methyl alpha to it and the ethyl carried by the oxygen. All four carbons and both oxygens are placed.

Step 7

Verification: every piece of data is explained, and carbon NMR would show four signals, all the carbons being nonequivalent.

Why

We go back down over the data one by one. An extra prediction, here the count of carbon signals, secures the conclusion.

The conclusion, written out

“The compound is ethyl ethanoate: the carbonyl at 17351735 cm−1^{-1} points to an ester, the triplet and the quartet make up the ethyl carried by the oxygen, and the singlet at 2.02.0 ppm is the methyl alpha to the carbonyl.”

The classic mistake on this problem: Proposing butanoic acid: it would have a very broad O−HO-H band near 30003000 and a signal beyond 1010 ppm, both absent.

Learn by heart

  • • Degree of unsaturation: 2nC+2+nN−nH−nX2\dfrac{2n_{C}+2+n_{N}-n_{H}-n_{X}}{2}, oxygen IGNORED. An aromatic ring is worth four.
  • • ODD mass: ODD number of nitrogens. M+1M+1 at 1.1 %1.1\,\% per carbon.
  • • M+2M+2 at 32 %32\,\%: one chlorine. M+2M+2 almost equal to MM: one bromine.
  • • Carbonyls: chloride 18001800, ester 17351735, aldehyde 17251725, ketone 17151715, acid 17101710, amide 16501650.
  • • The aldehyde also carries a DOUBLET at 27202720 and 28202820 cm−1^{-1}.
  • • The n+1n+1 rule: we count the NEIGHBOURS, never the hydrogens of the same carbon.
  • • Integration gives PROPORTIONS; the molecular formula gives the absolute number.
  • • Decoupled carbon NMR: one SINGLET per nonequivalent carbon, hence a symmetry counter.

Frequently asked questions

Why does oxygen not count in the degree of unsaturation?

Because an oxygen is divalent: it slips into a chain between two atoms without costing the molecule a single hydrogen. Nitrogen, being trivalent, adds one unit to the numerator of the formula instead, and halogens are counted like hydrogens since they occupy a single bond.

How do you tell a chlorine from a bromine in mass spectrometry?

By the height of the peak two units above the molecular ion peak. Chlorine has two isotopes in a ratio of three to one, which gives a peak at about thirty-two percent. Bromine has two almost equally abundant isotopes, which gives two peaks of practically equal height.

What exactly does the position of the carbonyl band tell us?

It names the derivative. An acyl chloride absorbs near eighteen hundred, an ester near seventeen thirty-five, an aldehyde near seventeen twenty-five, a ketone near seventeen fifteen and an amide near sixteen fifty. Conjugation lowers the value by about thirty units, ring strain raises it.

How do you apply the n plus one rule?

You count the hydrogens carried by the NEIGHBOURING carbons, and the signal splits into that number plus one. The hydrogens of the same carbon are equivalent and do not couple with each other. A methyl next to a methylene therefore gives a triplet, and that methylene gives a quartet: this is the ethyl pattern.

Why does carbon NMR show only singlets?

Because coupling with the hydrogens is removed by decoupling, and because carbon thirteen makes up only one percent of carbons. The probability that two neighbouring carbons are both carbon thirteen is therefore tiny. The spectrum then reads as a simple count of the nonequivalent carbons.

Practise it

Corrected exercises: Spectroscopy and structure determination, 202-SNU-RE

A method is proved on a paper, not on a sheet. The set for the same chapter takes each of these traps into a problem, with the solution written out step by step.

  • 15 corrected exercises
  • 150 points
  • 225 minutes
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© Ahmed Squalli Houssaini. Revision sheet published at www.letuteurscientifique.ca/en/fiches/cegep-snu-spectroscopy. Free for personal and classroom use; republishing it elsewhere requires written permission (legal notice).

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